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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6777749 chr3:179570929 A/G PHF11 chr13:50069746-50103123:+ -0.23 -6.34 5.29E-10 Box Plot
THCA rs677785 chr11:49249226 T/C FOLH1B chr11:89372395-89431886:+ 0.46 6.73 4.8E-11 Box Plot
THCA rs67780549 chr2:132197000 A/T CCDC74B chr2:130896860-130902707:- 0.36 6.52 1.82E-10 Box Plot
THCA rs6780449 chr3:125816063 A/G ROPN1 chr3:123687368-123711025:- -0.37 -6.64 8.37E-11 Box Plot
THCA rs6782373 chr3:113794154 C/T FAM89A chr1:231154704-231175992:- -0.32 -6.17 1.49E-9 Box Plot
THCA rs6782687 chr3:55229775 C/T GNPTG chr16:1401924-1414114:+ 0.23 5.88 7.52E-9 Box Plot
THCA rs67841554 chr8:10932042 T/C SGK223 chr8:8175258-8244008:- 0.35 6.11 2.02E-9 Box Plot
THCA rs67849263 chr8:11007544 G/T SGK223 chr8:8175258-8244008:- 0.33 5.93 5.9E-9 Box Plot
THCA rs67859638 chr6:27357978 A/G RNF5P1 chr8:38458179-38458718:- 0.76 6.41 3.42E-10 Box Plot
THCA rs67859638 chr6:27357978 A/G ZFP57 chr6:29640169-29648887:- 0.91 8.26 1.49E-15 Box Plot
THCA rs6786285 chr3:88318399 A/G MANEAL chr1:38259474-38266809:+ 0.32 5.89 7.11E-9 Box Plot
THCA rs67878650 chr6:28142587 G/C BTN3A2 chr6:26365387-26378548:+ -0.3 -6.39 3.88E-10 Box Plot
THCA rs6788841 chr3:88318340 T/A MANEAL chr1:38259474-38266809:+ 0.32 5.89 7.11E-9 Box Plot
THCA rs6790101 chr3:125706012 G/A ROPN1 chr3:123687368-123711025:- -0.34 -6.41 3.45E-10 Box Plot
THCA rs679155 chr11:77597839 C/T INTS4L1 chr7:64601603-64694600:+ 0.44 7.89 2.08E-14 Box Plot